Brief Introduction Don’t think I’m boring ! This is just a test text ! There will be more interesting things to share later ! 《礼记》里古语有说:“学然后知不足,教然后知困”,我深以为然。我希望在日常的技能分享中,能够助于加深自己对技术的理解,这也是我开始写个人博客文章的初衷。如果能顺便帮到其他人,那就更好。 2024-09-24
Peak calling for CLIP-Seq data by omniCLIP [1] Peak calling for CLIP-Seq data by omniCLIP [1]. I have used omniCLIP to analyze CLIP data a few months ago, but the software is poorly maintained. The author is also incompetent, as they didn’t even 2024-09-25 Bioinformatic
读《苏东坡新传》李一冰 读《苏东坡新传》李一冰. 我读过不少苏轼的诗词,也看过一些与他相关的传闻轶事,但对苏轼的了解依然是零碎杂乱的。比如我知道他很飞扬,却不知道,他也有沉郁的一面,我知道他的诗词多数奔放豁达,却不知道他亦曾历经磨难。于是我尝试想找一本比较公正的关于苏轼的传记读一读。 很庆幸,我看到了今天要介绍的这部李一冰所著的《苏东坡新传》。真的很惊喜,在这么多《苏传》里,居然还有着一位叫李一冰的老先生,穷八年之力,在 2024-10-13 读书
T检验在excel中的使用 T检验在excel中的使用. 在Excel中对两组数据做差异显著性检验是我们经常会用到的方法,多数使用者都理解并熟练其原理和使用方法的,但可能也有少数人,尽管会用各种软件来做差异性检验,但对其背后的数理并不完全清楚,比如说我自己。前段几天有人问到我,我支支吾吾给讲了个大概,发现自己好多细节并不清楚,后来经过搜索文章后,我才大致有一个相对清晰的认识,现在我把它写下来,以供诸君参考。 差异显著性检验是 2024-12-24 数理与统计
GSEA in drosophila GSEA in drosophila. This is a work log using R script to perform Gene Set Enrichment Analysis by differentialy expression genes in drosophila. and this script also applies to other species, such as hu 2024-12-31 Bioinformatic
2025-01-01元旦东湖骑行 2025-01-01元旦东湖骑行. 元旦休假,东湖骑行约5小时,73公里。 看了风景,晒了太阳。 . 上午9点起,10点从水生所门出发,走医学部去梨园绿道入口。 . 一条不知名小路,黄了的柳树叶有点好看,没人。 . 中午到了九峰,骑得很慢。 . 九峰菜市场的肥肠粉,味道不错,下次还去。 . 路上的一片油菜地,明年春天它应该会很好看。 . 夕阳,一道残阳铺水中。 2025-01-01 生活
Differential translation gene by RiboSeq Ribo-Seq analysis for mRNA translation. we use Ribo-Seq in combination with RNA-Seq data to investigate the sig. differential translation genes in transcriptome by condition. 1. Data prepare1.1 veri 2025-01-02 Bioinformatic
Highlighting the target gene in scatterplot Highlighting the target gene in scatterplot. the scatter points with different colors and sizes were used to distinguish the target gene from other genes, and labeled the target gene with gene symbo 2025-01-06 R
Add full name and description for target genes Add full name and description for target genes. Some genes’ functions may not be easily inferred from their abbreviated names, therefore, to be better understand the genes, we need to include their fu 2025-01-10 Bioinformatic
Calculate the GC content in a DNA/RNA sequence Calculate the GC content in a DNA/RNA sequence. This is a simple initial Python script to calculate the GC content of DNA/RNA sequences, specifically for cases where each FASTA file contains 2025-01-10 Python